SELECT 
  cscart_product_prices.product_id, 
  MIN(
    IF(
      cscart_product_prices.percentage_discount = 0, 
      cscart_product_prices.price, 
      cscart_product_prices.price - (
        cscart_product_prices.price * cscart_product_prices.percentage_discount
      )/ 100
    )
  ) AS price 
FROM 
  cscart_product_prices 
WHERE 
  cscart_product_prices.product_id IN (
    71, 42, 43, 44, 45, 46, 70, 47, 48, 41, 49, 
    50, 51, 52, 53, 54, 55, 56, 57, 58, 59, 
    60, 61, 62, 63, 64, 65, 66, 67, 68, 69, 
    72
  ) 
  AND cscart_product_prices.lower_limit = 1 
  AND cscart_product_prices.usergroup_id IN (0, 1) 
GROUP BY 
  cscart_product_prices.product_id

Query time 0.00819

JSON explain

{
  "query_block": {
    "select_id": 1,
    "filesort": {
      "sort_key": "cscart_product_prices.product_id",
      "temporary_table": {
        "nested_loop": [
          {
            "table": {
              "table_name": "cscart_product_prices",
              "access_type": "ALL",
              "possible_keys": [
                "usergroup",
                "product_id",
                "lower_limit",
                "usergroup_id"
              ],
              "rows": 102,
              "filtered": 31.37254906,
              "attached_condition": "cscart_product_prices.lower_limit = 1 and cscart_product_prices.product_id in (71,42,43,44,45,46,70,47,48,41,49,50,51,52,53,54,55,56,57,58,59,60,61,62,63,64,65,66,67,68,69,72) and cscart_product_prices.usergroup_id in (0,1)"
            }
          }
        ]
      }
    }
  }
}

Result

product_id price
41 70.53000000
42 51.00000000
43 55.60000000
44 96.00000000
45 82.68000000
46 85.00000000
47 122.00000000
48 50.00000000
49 76.00000000
50 115.00000000
51 0.00000000
52 73.10000000
53 144.83000000
54 181.03000000
55 136.18000000
56 94.60000000
57 70.53000000
58 136.65000000
59 91.55000000
60 0.00000000
61 84.08000000
62 96.70000000
63 141.78000000
64 29.20000000
65 25.68000000
66 206.28000000
67 206.28000000
68 20.00000000
69 23.50000000
70 90.00000000
71 185.00000000
72 219.00000000